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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Danio rerio
,
Rattus norvegicus
,
Xenopus laevis
,
Oryzias latipes
,
Gallus gallus
,
Salmo salar
,
Canis lupus familiaris
,
Ictalurus punctatus
,
Ovis aries
,
Oncorhynchus mykiss
,
Gasterosteus aculeatus
,
Pimephales promelas
,
Gadus morhua
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Ictalurus furcatus
,
Homo sapiens
,
Oreochromis niloticus
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Fundulus heteroclitus
,
Sparus aurata
,
Dicentrarchus labrax
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Dissostichus mawsoni
,
Osmerus mordax
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Anoplopoma fimbria
,
Cyprinus carpio
,
Esox lucius
,
Rana catesbeiana
,
Takifugu rubripes
,
Cynops pyrrhogaster
,
Sebastes caurinus
,
Misgurnus anguillicaudatus
,
Perca flavescens
,
Paralabidochromis chilotes
,
Hippoglossus hippoglossus
,
Ambystoma tigrinum tigrinum
,
Cavia porcellus
,
Bos indicus
,
Rutilus rutilus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Poecilia reticulata
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Oncorhynchus tshawytscha
,
Capra hircus
,
Paralichthys olivaceus
,
Psetta maxima
,
Pan troglodytes verus
,
Lates calcarifer
,
Oncorhynchus nerka
,
Sebastes rastrelliger
,
Thymallus thymallus
,
Solea senegalensis
,
Coregonus clupeaformis
,
Thunnus thynnus
,
Cynoglossus semilaevis
,
Salvelinus fontinalis
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST033146
species:
Bos taurus
miRNA family:
mir-23
source:
miRBase, original name:
bta-mir-23b
(
MI0005066
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCACATTGCCAGGGATTACCAC
miRNA*
GGGTTCCTGGCATGCTGATTT
mismatches:
2
bulges:
4
View larger
pre-miRNA
GGGTTCCTGGCATGCTGATTT
GTGACTTAAGATTAAA
ATCACATTGCCAGGGATTACCAC
dot-bracket secondary structure
((((((((((((((.((((((
..............))
)))))).))))))))))..))..
SIMILARITIES
miRBase
eca-mir-23b
:
2e-28
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-23: 2e-22
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned, Solexa
references
[
1
] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ,
PLoS One. 4:e6349(2009).
,
"Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"
[
2
] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP,
Physiol Genomics. 29:35-43(2007).
,
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"
[
3
] Gu Z, Eleswarapu S, Jiang H,
FEBS Lett. 581:981-988(2007).
,
"Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"