ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-455
source: miRBase, original name: bta-mir-455 (MI0005049)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGTGCCTTTGGACTACATC miRNA* TGCAGTCCATGGGCATATACA mismatches: 3 bulges: 0 |
pre-miRNA
TCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTA
dot-bracket secondary structure
.....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP, Physiol Genomics. 29:35-43(2007)., "Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"
TCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTA
dot-bracket secondary structure
.....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..
SIMILARITIES| miRBase mml-mir-455: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-455: 1e-37 |
Identical with: hsa-mir-455 from miRBase (MNEST028666) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP, Physiol Genomics. 29:35-43(2007)., "Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"
