ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-664
source: miRBase, original name: bta-mir-664 (MI0011547)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGGCTGGGGTGTGTGTGGATG miRNA* TTCGTTTACTCCCTAGCCTCCA mismatches: 4 bulges: 0 |
pre-miRNA
GGGACATTAAAACACAGGCTGGGGTGTGTGTGGATGGAGACTGTTACTCTATTCGTTTACTCCCTAGCCTCCAGATATGCCT
dot-bracket secondary structure
(((.(((........(((((((((.(((..(((((((((.......)))))))))..))).)))))))))......))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ, PLoS One. 4:e6349(2009)., "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"
GGGACATTAAAACACAGGCTGGGGTGTGTGTGGATGGAGACTGTTACTCTATTCGTTTACTCCCTAGCCTCCAGATATGCCT
dot-bracket secondary structure
(((.(((........(((((((((.(((..(((((((((.......)))))))))..))).)))))))))......))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SNORA36: 2e-36 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ, PLoS One. 4:e6349(2009)., "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"
