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Species belonging to selected taxon:
Bos taurus
,
Ovis aries
,
Bos indicus
,
Bos sp.
,
Capra hircus
ABOUT THIS RECORD
ID:
MNEST033516
species:
Bos taurus
miRNA family:
mir-2284
source:
miRBase, original name:
bta-mir-2284k
(
MI0011400
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAAAAGTTCGGTCGGGTTTTT
miRNA*
AAACCAAAAGAACTTTTTG
mismatches:
4
bulges:
2
View larger
pre-miRNA
AGTTGACCA
GAAAAGTTCGGTCGGGTTTTT
CTGCAACATCTAATGAAA
AAACCAAAAGAACTTTTTG
GCCACCT
dot-bracket secondary structure
((.((.(((
((((.((((.....(((((((
...((........)).))
)))))....))))))))))
).)).))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ,
PLoS One. 4:e6349(2009).
,
"Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection"