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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000338
species: Cichorium intybus
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCATA

miRNA*
 TGCTCACTTCTCTTGCTGTCAGC

mismatches: 0
bulges: 2
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pre-miRNA
 TAAAAAGAAAGCTGACAGAAGAGAGTGAGCATATGCAAACAATTGTATAGAGAGGTATACACTTGTAAATATGCGTGTGCTCACTTCTCTTGCTGTCAGCT
ACTCGGT

dot-bracket secondary structure
)........((((((((((((((((((((((((((((.((((.((((((......)))))).)))).....))))))))))))).)))))).)))))))))
.......


SIMILARITIES
miRBase zma-MIR156c: 3.0E-7

PMRD zma-miR156c: 3.0E-7

microPC miR156: 1.0E-43		UniProt no hits

RFAM 6mir-156: 0.0004		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046798)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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