ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCTTCC miRNA* AAGAAGAAGACGATCATGAAT mismatches: 5 bulges: 0 |
pre-miRNA
CTCTCTCTTCTTCATCATCATCATCATCTTCCTCTCGATCGGAAAATAGTCAAAAGTTTCTATAAATTGTTGAATCAAAGCAGAGAAGAAGAAGAAGACG
ATCATGAATCCAGATTC
dot-bracket secondary structure
.....(((..(((((.(((.((.((.(((((.((((.....((......((((.(((((....))))).)))).))......)))).))))).)).)).)
)).)))))...)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
CTCTCTCTTCTTCATCATCATCATCATCTTCCTCTCGATCGGAAAATAGTCAAAAGTTTCTATAAATTGTTGAATCAAAGCAGAGAAGAAGAAGAAGACG
ATCATGAATCCAGATTC
dot-bracket secondary structure
.....(((..(((((.(((.((.((.(((((.((((.....((......((((.(((((....))))).)))).))......)))).))))).)).)).)
)).)))))...)))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
