ABOUT THIS RECORD

ID: MNEST034659
species: Oryzias latipes
miRNA family: miR-430a
source: miRBase, original name: ola-mir-430a-3 (MI0013017)

Taxonomy by NCBI:
Oryzias latipes Oryzias Oryziinae Adrianichthyidae Adrianichthyoidei Beloniformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GGACATCAAGATGACCTTGACACAGGCACTGACTCTTTCTTCTTTGTAGTAAGTGCTACTTGTTGGGGTAATTTTGGTGTCC

dot-bracket secondary structure
((((((((((((.((((..(((..((((((.((((..........).))).))))))...)))..)))).))))))))))))


SIMILARITIES

miRBase ola-mir-430a-2: 2e-41 PMRD no hits microPC no hits

UniProt no hits RFAM miR-430: 4e-34

Identical with: ola-mir-430a-4 from miRBase (MNEST034660)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: in-situ, Northern

references
[1] Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K, Gene. 449:41-49(2010)., "Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development"