ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GGTCATGCTGTAACAGCCTCACT mismatches: 2 bulges: 2 |
pre-miRNA
TGTCTGGATTGGAAGTCTACAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGCTGAAGAAGAGTGTTAAATGCTAACCCTTACTA
GGTCATGCTGTAACAGCCTCACTCCTTCCTATTTGGGGACCCAGTACAGTA
dot-bracket secondary structure
...(((.(((((..((((.((((((((..(((((.((((.(((((((((((((((((((((....))))))))..(((.((((.....)))).))).)))
))))))))))...)))).)))))..)))))..))).))))))))).)))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence
TGTCTGGATTGGAAGTCTACAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGCTGAAGAAGAGTGTTAAATGCTAACCCTTACTA
GGTCATGCTGTAACAGCCTCACTCCTTCCTATTTGGGGACCCAGTACAGTA
dot-bracket secondary structure
...(((.(((((..((((.((((((((..(((((.((((.(((((((((((((((((((((....))))))))..(((.((((.....)))).))).)))
))))))))))...)))).)))))..)))))..))).))))))))).)))..
SIMILARITIES| miRBase gma-MIR167a: 2e-31 PMRD gma-miR167a: 2e-31 microPC miR167: 8e-46 | UniProt no hits RFAM MIR167_1: 1e-20 | most similar mature miRNAs |
Identical with: miR167 from microPC (MNEST045269) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
