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Species belonging to selected taxon:

Glycine soja, Glycine max



ABOUT THIS RECORD

ID: MNEST003489
species: Glycine max
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGTCGTCCTGAGACCACATG

mismatches: 3
bulges: 0
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pre-miRNA
 GCGGAGGTAGAGGAATTCTACAGGGTCGTCCTGAGACCACATGAAACAGATTCAAAATACAAGCATATTTGCTTGTGACCTTTTGTGACTCAGTTCATGT
GTTCTCAGGTCGCCCCTGCTGAACTTTTCTCTACCAC

dot-bracket secondary structure
.....(((((((((((((..(((((.((.(((((((.((((((((...((.(((...((((((((....))))))))........))).))..)))))))
).))))))).)).)))))..)))..))))))))))..


SIMILARITIES
miRBase mtr-MIR398b: 0.000000002

PMRD vvi-miR398c: 0.00000003

microPC miR398: 1e-50		UniProt no hits

RFAM MIR398: 0.00000003		most similar mature miRNAs

Identical with: miR398 from microPC (MNEST045294)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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