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Species belonging to selected taxon:
Bicyclus anynana
,
Drosophila melanogaster
,
Bombyx mori
,
Aedes aegypti
,
Ixodes scapularis
,
Litopenaeus vannamei
,
Lepeophtheirus salmonis
,
Acyrthosiphon pisum
,
Culex quinquefasciatus
,
Anopheles gambiae
,
Dendroctonus ponderosae
,
Daphnia pulex
,
Nasonia vitripennis
,
Drosophila simulans
,
Petrolisthes cinctipes
,
Aphis gossypii
,
Tetranychus urticae
,
Glossina morsitans morsitans
,
Choristoneura fumiferana
,
Spodoptera frugiperda
,
Heliothis virescens
,
Rhipicephalus microplus
,
Locusta migratoria
,
Phlebotomus papatasi
,
Penaeus monodon
,
Drosophila sechellia
,
Drosophila auraria
,
Artemia franciscana
,
Nilaparvata lugens
,
Antheraea assama
,
Drosophila pseudoobscura
,
Teleopsis dalmanni
,
Lutzomyia longipalpis
,
Caligus rogercresseyi
,
Nasonia giraulti
,
Homarus americanus
,
Bombus terrestris
,
Myzus persicae
,
Drosophila willistoni
,
Drosophila ananassae
,
Solenopsis invicta
,
Drosophila virilis
,
Drosophila erecta
,
Drosophila grimshawi
,
Ceratitis capitata
,
Spodoptera littoralis
,
Peregrinus maidis
,
Samia cynthia ricini
,
Drosophila mojavensis
,
Danaus plexippus
,
Rhipicephalus appendiculatus
,
Cochliomyia hominivorax
,
Anopheles stephensi
,
Diabrotica virgifera virgifera
,
Haematobia irritans irritans
,
Eriocheir sinensis
,
Papilio xuthus
,
Onychiurus arcticus
,
Rhodnius prolixus
,
Carcinus maenas
,
Polypedilum vanderplanki
,
Ostrinia nubilalis
,
Lernaeocera branchialis
,
Caligus clemensi
,
Laupala kohalensis
,
Frankliniella occidentalis
,
Daphnia magna
,
Gammarus pulex
,
Trichoplusia ni
,
Calanus finmarchicus
,
Gryllus bimaculatus
,
Drosophila yakuba
,
Epiphyas postvittana
,
Callinectes sapidus
,
Peripatopsis sedgwicki
,
Fenneropenaeus chinensis
,
Apis mellifera
,
Tribolium castaneum
ABOUT THIS RECORD
ID:
MNEST034968
species:
Ixodes scapularis
miRNA family:
mir-87
source:
miRBase, original name:
isc-mir-87
(
MI0012287
)
Taxonomy by NCBI:
Ixodes scapularis
Ixodes
Ixodinae
Ixodidae
Ixodoidea
Ixodida
Parasitiformes
Acari
Arachnida
Chelicerata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGAGCAAAGTTTCAGGTGTG
miRNA*
TGCCTGAAAATTTGTCTCAAACCT
mismatches:
2
bulges:
3
View larger
pre-miRNA
CACACATCTCGCTTCTTGACTGCC
TGCCTGAAAATTTGTCTCAAACCT
TTCATAGTGTAG
GTGAGCAAAGTTTCAGGTGTG
TTGTCTTGGAGGACACACT
G
dot-bracket secondary structure
........((.((((..(((.((.
(((((((((.((((.(((..((((
..........))
))))))))).))))))))).)
).)))..))))))......
.
SIMILARITIES
miRBase
bma-mir-87a
:
0.00000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-87: 0.0000004
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"