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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003502
species: Glycine max
miRNA family: MIR171
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATATC

miRNA*
 TATTGGCCTGGTTCACTCAGA

mismatches: 2
bulges: 0
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pre-miRNA
 AAGACACAAGTATATGAAGTAGTTATTGTGATATTGGCCTGGTTCACTCAGACATGTATACCACGGCACGGTTGTGTCCTTGCTAGAAAGATTTAAAACA
AAATACATGTTGTGATTGTGGTTTTGGGTTTGATTGAGCCGTGCCAATATCTCAGTGCTATTTCATGTTTGCAAATGAT

dot-bracket secondary structure
.........((((((((((((((.((((.(((((((((.(((((((.((((((.((...((((((.((((..(((((..(((.((((....))))...))
).)))))...))))..))))))..)).)))))).))))))).))))))))).))))))))))))))))..)).......


SIMILARITIES
miRBase mtr-MIR171g: 0.00000000000001

PMRD mtr-miR171g: 0.00000000000001

microPC miR171: 2e-65		UniProt no hits

RFAM MIR171_1: 0.00000000000005		most similar mature miRNAs

Identical with: miR171 from microPC (MNEST045683)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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