ABOUT THIS RECORDspecies: Daphnia pulex
miRNA family: mir-315
source: miRBase, original name: dpu-mir-315 (MI0012241)
Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGATTGTTGCTCAGAAAGC miRNA* mismatches: 4 bulges: 93 |
pre-miRNA
TATATAATAGCTCCCAATGTTTTTGATTGTTGCTCAGAAAGCCGTGCCATTTCACATTTTTGGCTGACGTCAAAAAATCACAACTGGCTTTCGAGAAATA
A
dot-bracket secondary structure
....(((.(((.......))).)))..((((.(((.((((((((((......))).((((((((....)))))))).........)))))))))).))))
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
TATATAATAGCTCCCAATGTTTTTGATTGTTGCTCAGAAAGCCGTGCCATTTCACATTTTTGGCTGACGTCAAAAAATCACAACTGGCTTTCGAGAAATA
A
dot-bracket secondary structure
....(((.(((.......))).)))..((((.(((.((((((((((......))).((((((((....)))))))).........)))))))))).))))
.
SIMILARITIES| miRBase aae-mir-315: 0.00000002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-315: 0.0000004 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
