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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000353
species: Cichorium intybus
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGTACGTGCT

miRNA*
 CATATACCCTTACTCTCCATC

mismatches: 4
bulges: 0
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pre-miRNA
 AACGACTTCTTTTTGAAGATATGGTTCATGCTGGAGAAGCAGGGTACGTGCTAAATCCATGATGTGATTTAGCATATACCCTTACTCTCCATCTTGAATC
GGTTTCTTTAATTCTTCACAA

dot-bracket secondary structure
............(((((((..(((((((...((((((...((((((.((((((((((((...)).)))))))))).))))))...))))))...))))))
)...)))))))..........


SIMILARITIES
miRBase ptc-MIR164f: 0.000006

PMRD ptc-miR164f: 0.000006

microPC miR164: 0.00009		UniProt no hits

RFAM MIR164: 0.0001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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