ABOUT THIS RECORDspecies: Apis mellifera
miRNA family: mir-25
source: miRBase, original name: ame-mir-92b-1 (MI0010612)
Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATTGCACCCGTCCCGGCCTGA miRNA* AGGTCAGGACTAATGCAAATAT mismatches: 6 bulges: 0 |
pre-miRNA
CACGAAGCGTATTCAATTAGGTCAGGACTAATGCAAATATGTAGTGTCGACATCAAATTGCACCCGTCCCGGCCTGATTGAGTGCGCGTAAATC
dot-bracket secondary structure
......(((((((((((((((((.((((...(((((..((((.......))))....)))))...)))).))))))))))))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
CACGAAGCGTATTCAATTAGGTCAGGACTAATGCAAATATGTAGTGTCGACATCAAATTGCACCCGTCCCGGCCTGATTGAGTGCGCGTAAATC
dot-bracket secondary structure
......(((((((((((((((((.((((...(((((..((((.......))))....)))))...)))).))))))))))))))))).......
SIMILARITIES| miRBase ame-mir-92b-2: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ame-mir-92b-2 from miRBase (MNEST035365) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
