miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cichorium intybus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Taraxacum kok-saghyz, Taraxacum officinale, Cichorium endivia



ABOUT THIS RECORD

ID: MNEST000354
species: Cichorium intybus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACGTCATCATCATCATCTTCG

miRNA*
 AGGATCATGATATGATTCAT

mismatches: 4
bulges: 1
View larger
pre-miRNA
 AAATGGGATCGGAGGATCATGATATGATTCATAATAAAAATAAAGATAGGTTTTCGTCTTCAACGTCATCATCATCATCTTCGCACTGTAAC

dot-bracket secondary structure
...........((((((.((((((((((.....((.(((((........))))).)).......))))).))))).))))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-598: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;