ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR157
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAGGTATAGAGAGCAA miRNA* GATTTTTTTACCTTTGTCAGC mismatches: 2 bulges: 0 |
pre-miRNA
CTCAAACTGATGGAGTCCAGGTGACAGAGGTATAGAGAGCAAGAAGGCCAAGTGCTATGGTAGATATGGATACTTTGAGACTGCTTGTTTTGGACAGAAA
CAAGCCCCATTTTTTTTAGGTTTAATTGATTTTTTTACCTTTGTCAGCAGGTCCCCCCCCCCCCCC
dot-bracket secondary structure
.(((...))).(((..((..((((((((((((.(((((.(((..(((((.(((((((((.....))))).)))).(((((..(((((((((.....))))
)))))........))))))))))..))).))))).))))))))))).).)))))............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTCAAACTGATGGAGTCCAGGTGACAGAGGTATAGAGAGCAAGAAGGCCAAGTGCTATGGTAGATATGGATACTTTGAGACTGCTTGTTTTGGACAGAAA
CAAGCCCCATTTTTTTTAGGTTTAATTGATTTTTTTACCTTTGTCAGCAGGTCCCCCCCCCCCCCC
dot-bracket secondary structure
.(((...))).(((..((..((((((((((((.(((((.(((..(((((.(((((((((.....))))).)))).(((((..(((((((((.....))))
)))))........))))))))))..))).))))).))))))))))).).)))))............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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