ABOUT THIS RECORDspecies: Apis mellifera
source: miRBase, original name: ame-mir-3771 (MI0016177)
Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAAACACAGCGAGTTGCACGAG miRNA* CGTTAATATCGCAGTGTTGAACGTG mismatches: 3 bulges: 4 |
pre-miRNA
GATGCTCGTTAATATCGCAGTGTTGAACGTGGCTAAGATTATAAAACACAGCGAGTTGCACGAGCACGT
dot-bracket secondary structure
..(((((((((((.((((.(((((....((((......))))..))))).)))))))).)))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID
references
[1] Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F, Insect Mol Biol. 19:799-805(2010)., "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera"
GATGCTCGTTAATATCGCAGTGTTGAACGTGGCTAAGATTATAAAACACAGCGAGTTGCACGAGCACGT
dot-bracket secondary structure
..(((((((((((.((((.(((((....((((......))))..))))).)))))))).)))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID
references
[1] Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F, Insect Mol Biol. 19:799-805(2010)., "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera"
