ABOUT THIS RECORDspecies: Bombyx mori
source: miRBase, original name: bmo-mir-2744 (MI0012195)
Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGAGAGTCCTAGCTAG miRNA* GCTCAGCCTTGTCATCGTC mismatches: 5 bulges: 2 |
pre-miRNA
TCGGCAGCAGCTCAGCCTTGTCATCGTCATCGAATGCCGGTGGTTGGCCTGAAGGCGTACAGGGAGGCATAGTACGGTATTCGGATTTGAGAGTCCTAGC
TAGTCGCCA
dot-bracket secondary structure
..(((.((((((.((..((.(((..(((..(((((((((...(((..((((........))))..)))......)))))))))))).))).))..)))))
).)).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, RT-PCR
references
[1] Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J, Genomics. 94:438-444(2009)., "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome"
TCGGCAGCAGCTCAGCCTTGTCATCGTCATCGAATGCCGGTGGTTGGCCTGAAGGCGTACAGGGAGGCATAGTACGGTATTCGGATTTGAGAGTCCTAGC
TAGTCGCCA
dot-bracket secondary structure
..(((.((((((.((..((.(((..(((..(((((((((...(((..((((........))))..)))......)))))))))))).))).))..)))))
).)).))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, RT-PCR
references
[1] Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J, Genomics. 94:438-444(2009)., "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome"
