miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000359
species: Citrus aurantium
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Citrus aurantium Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTATAGCATCATGAGCAATCA

miRNA*
 ACTGCTCATGATGTTATATCGA

mismatches: 1
bulges: 1
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pre-miRNA
 CAAACACAAAGAAAAGATTTTGTATAGCATCATGAGCAATCAGCCTTATATTTTTAGCAAAGTGACTGCTCATGATGTTATATCGATTCATCTTCTCAAT
GCCT

dot-bracket secondary structure
..........((.(((((.(((((((((((((((((((.(((..(((............)))))).)))))))))))))))).)))...))))).))...
....


SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 0.000000001

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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