ABOUT THIS RECORD

ID: MNEST036166
species: Drosophila erecta
miRNA family: mir-9
source: miRBase, original name: der-mir-9a (MI0009043)

Taxonomy by NCBI:
Drosophila erecta melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGC

dot-bracket secondary structure
(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).))))


SIMILARITIES

miRBase dan-mir-9a: 5e-39 PMRD no hits microPC no hits

UniProt no hits RFAM mir-9: 1e-27

Identical with: dps-mir-9a from miRBase (MNEST036913)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie, Nature. 450:203-218(2007)., "Evolution of genes and genomes on the Drosophila phylogeny"