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Species belonging to selected taxon:
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003659
species:
Zea mays
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGATGGAGTAGA
miRNA*
TACTCTCTCTGTCCCAAAATA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GATTTTACATAA
TACTCTCTCTGTCCCAAAATA
TAATTTGTTTTAGACTACAGATACATTCATTAATCAACATATGAATGTAGTTGGTATGTAACTATGT
ATGTCTACATTCATTATTATTCATTCGAATGTGAACAGAAAAAAAGAGGGCTAGAAAGAACTATA
TTTTGGGACAGATGGAGTAGA
TTACTATAC
dot-bracket secondary structure
............
((((((.((((((((((((((
((.(((.((((((.((.....(((((((............((((((((((...((((((....))))
))..))))))))))............))))))).............))..)))))).))).))))
)))))))))))).))))))..
.........
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11090-akr
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.00005
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record