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Species belonging to selected taxon:
Zea mays
ABOUT THIS RECORD
ID:
MNEST003669
species:
Zea mays
miRNA family:
miR167g
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTCATGCTGTAGTTTCATCT
miRNA*
GTGAAGCTGCCAGCATGATCTG
mismatches:
1
bulges:
1
View larger
pre-miRNA
ATGTAGTGGTGCACCACGAGTTG
GTGAAGCTGCCAGCATGATCTG
GTTCTGATGGTGGTGGTATATGTAAGATGGATGTAATCTATACTACGGCCCCTGT
TAATTTCTCTCTCTCTCCCCGGTCCCTGACTGTCATATATGGATCGACGAATCCAAGATGAGAGGGGAATGGAGAGAGAGAGAGAGGGTAATTATGAGCA
CCAGGACCA
GGTCATGCTGTAGTTTCATCT
GCTGGTGGCCGCACATCGAA
dot-bracket secondary structure
........((((.((((.(((.(
((((((((((.(((((((((((
((((((.((..((.(((....(((..((((((...))))))..))).))))).((
((.((((((((((((((.(((.(((((.....((((...(((((......)))))..))))..))))).))).)))))))))))))).))))......))
.))))))))
)))))))))))))))))))).
))).))))..))))......
SIMILARITIES
miRBase
zma-MIR167g
:
2e-56
PMRD
zma-miR167g
:
2e-56
microPC
miR167
:
2e-20
UniProt
no hits
RFAM
MIR167_1: 2e-78
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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