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Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003692
species: Zea mays
miRNA family: miR160c
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCGTGCATGGTGCCAAGCATA

miRNA*
 TGCCTGGCTCCCTGTATGCCA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CTTAGGATGTGCCTGGCTCCCTGTATGCCACTCATCTAGAGCAACGACAGCTTGGTATGGTTGCCTATAAGATGGATGGCGTGCATGGTGCCAAGCATAT
CTCGC

dot-bracket secondary structure
....((((((((.((((.((.(((((((((.((((((((.(((((.((......))...)))))))...)))))).))))))))).)).)))).))))))
))...


SIMILARITIES
miRBase zma-MIR160c: 1e-49

PMRD zma-miR160c: 1e-49

microPC miR160: 2e-42		UniProt no hits

RFAM mir-160: 0.000000000000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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