ABOUT THIS RECORD

ID: MNEST036939
species: Drosophila pseudoobscura
miRNA family: mir-193
source: miRBase, original name: dps-mir-193 (MI0011621)

Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCGTATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAG
TA

dot-bracket secondary structure
(((.(.((((((.((((((((((..(((..(((.((((((((..((((....)))))))))).....)).)))..)))..)))))))))))))))).).)
))


SIMILARITIES

miRBase dsi-mir-193: 3e-41 PMRD no hits microPC no hits

UniProt no hits RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references
[1] Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC, Nat Genet. 42:6-9(2010)., "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila"