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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000370
species: Citrus reticulata
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Citrus reticulata Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCTTCATCATCATCCACC

miRNA*
 TGGTGGTCGTGGCGTGATG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 GGGTAAAGTTGGTGGTGGTCGTGGCGTGATGGGATTTTGTATCTGTCCGTTAGAGACTCCGGCGAGGCTACTGTGGACCACTAGCTTCTTCCGCCACAAG
CTTATGATTTTCTAATAATTTTCATAATTTTAATTACAAAATCACCATCATCTTCATCATCATCCACCTCATAAAAA

dot-bracket secondary structure
..........(((((((((.((((.((((((((((((((((...(((.......)))...((((((((((.((.....)).)))))))....)))..(((
.((((((..((.....))...)))))).)))...))))))))).)))))))..)))).)))).))))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-598: 0.0006		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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