ABOUT THIS RECORD

ID: MNEST037024
species: Drosophila pseudoobscura
miRNA family: mir-2517
source: miRBase, original name: dps-mir-2517a-3 (MI0011725)

Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CCGGGTCAAATGGTCCAGAGTTTTCAGATCCTCAAATACCATATGTATTATTTGACTTTCATATTGATTTGGTGGATTTGAAAACTTTTCACTTAAGAAC
ACTTG

dot-bracket secondary structure
..((..(....)..)).((((((((((((((((((((.(.(((((..............))))).))))))).)))))))))))))).............
.....


SIMILARITIES

miRBase dps-mir-2517a-1: 6e-55 PMRD no hits microPC no hits

UniProt no hits RFAM no hits

Identical with: dps-mir-2517a-2 from miRBase (MNEST037023)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references
[1] Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC, Nat Genet. 42:6-9(2010)., "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila"