ABOUT THIS RECORD

ID: MNEST037229
species: Drosophila simulans
miRNA family: mir-252
source: miRBase, original name: dsi-mir-252 (MI0011751)

Taxonomy by NCBI:
Drosophila simulans melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TGTGCCGTCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGC
GGCGAGTTGCCCAGCA

dot-bracket secondary structure
.((...((..(((..((......(((((..((((((((.(.((.(((((((....(((((....)).)))..))))))).)).).))))))))..)))))
))..))).))...)).


SIMILARITIES

miRBase dme-mir-252: 1e-47 PMRD no hits microPC no hits

UniProt no hits RFAM mir-252: 2e-55

Identical with: dme-mir-252 from miRBase (MNEST036404)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references
[1] Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC, Nat Genet. 42:6-9(2010)., "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila"