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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003733
species:
Zea mays
miRNA family:
MIRf1229
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAGAGTGAGCACACACGGTG
miRNA*
CTGTGCGTGCTCACTCTCTAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AAGGCAAACAGTAGATGGGTTTTTGAAGGTTTGACAGA
AGAGAGTGAGCACACACGGTG
GTTTCTTACCATGAGTGTCATGCTAGGAG
CTGTGCGTGCTC
ACTCTCTAT
CTGTCAGCCACTCATCAAGCCCATCTGTCTTAGCT
dot-bracket secondary structure
..(((.((...(((((((((((.(((.((((.((((((
(((((((((((((.((((((.
...(((((.(((((...))))).))))))
))))).))))))
))))))).)
)))))))))..)))..)))))))))))..)).)))
SIMILARITIES
miRBase
zma-MIR156b
:
1e-56
PMRD
zma-miR156b
:
1e-56
microPC
miR156
:
3e-36
UniProt
no hits
RFAM
mir-156: 1e-32
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record