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Species belonging to selected taxon:
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003767
species:
Zea mays
miRNA family:
MIRf1698
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATCCTGGCACCACCCGGCG
miRNA*
CCGGGTGGTGATAGGATCTCG
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTCTGGTCCCG
AGATCCTGGCACCACCCGGCG
GCCGGGCTCCACCTGCTGCAGGGGTGGACGGTGGTCATGTCCGCCGCCGCCGCCGCCTCTGCCCCTCT
GCCA
CCGGGTGGTGATAGGATCTCG
TGAAGGAG
dot-bracket secondary structure
.(((..((.((
((((((((.((((((((((.(
((.(((...........((((((((((.(((((((..........))))))))))))))))))))...
))).
)))))))))).))))))))))
.)).))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf12033-akr
:
0.00003
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record