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Species belonging to selected taxon:
Zea mays
ABOUT THIS RECORD
ID:
MNEST003771
species:
Zea mays
miRNA family:
MIRf1372
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGAGCTTCTCGAAGATGTCG
miRNA*
GCGTGCTTGGCGAGCTCGCCG
mismatches:
3
bulges:
0
View larger
pre-miRNA
CCGCCTTGGTCCCTTCGGAGACG
GCGTGCTTGGCGAGCTCGCCG
GGGAGGACGAGGCGCACCGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTT
GTTGTAGCGGGCGAGCTTGGCTGCCTCGGCG
GCGAGCTTCTCGAAGATGTCG
TTGATGAAGGAGTTCATGAT
dot-bracket secondary structure
.(((((((...(((((.....((
(((.((((...)))).)))))
.))))).)))))))((((....(((((.....))))).))))...(((((((((((
....((((((.((((...(((((((.....)
)).)))).))))......)))
)))...)))))))))))...
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10132-akr
:
7e-62
microPC
no hits
UniProt
sp|Q6F362|H2B9_ORYSJ: 1e-17
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record