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Species belonging to selected taxon:
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003775
species:
Zea mays
miRNA family:
MIR2504
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACCGAGTTTATAGAAAAA
miRNA*
TTTCTAAAAGCTTGATCAAAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
CGTCTCAAATAATAGTTTACTTTAGCTTTGTGCCTCTGTCCTAAGTCAAACTTGTTTAACT
TTGACCGAGTTTATAGAAAAA
TGCATCAACATCTAGAAT
ACCAAATTCTTTTCATTAATTTCTTCATGAGACATGTCTTGATAGTGAATTTGATTTAACTTCTAGATACTAATGTATT
TTTCTAAAAGCTTGATCAAAA
CTAGAGAAGTTTGACATAGGACAAAACTAAAGTAAACTATAATT
dot-bracket secondary structure
.......(((.((((((((((((((.(((.......(((((((.(((((((((.((((..(
((((.(((((((.((((((((
(((((....(((((((((
(.(((((((...(((...((.((((...)))).))....)))....)))))))...))..))))))))....)))))))
)))))).))))))).))))).
.)))).))))))))).)))))))))))))))))))))))).)))
SIMILARITIES
miRBase
ssp-MIR437a
:
2e-19
PMRD
sbi-miR437v
:
9e-16
microPC
miR437
:
2e-19
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record