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Species belonging to selected taxon:

Tribolium castaneum



ABOUT THIS RECORD

ID: MNEST037775
species: Tribolium castaneum
source: miRBase, original name: tca-mir-279c (MI0016312)

Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGGTGTTCGTTTCGAGTCACA

miRNA*
 TGACTAGATCGAACATTCGCT

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TTTCGCCGCTTAAATTCATATTTTTTTCGGGTGTTCGTTTCGAGTCACATTGTGATTGATTTTGTGACTAGATCGAACATTCGCTCGAAGTATGGAAAAA
TCCGCGGGACTT

dot-bracket secondary structure
..((.((((.....((((((((((...((((((((((..((.(((((((..((.....))..))))))).)).))))))))))...))))))))))....
...))))))...


SIMILARITIES
miRBase tca-mir-279c: 1e-46

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID

references
[1] Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S, Genome Biol Evol. 2:686-696(2010)., "Functional shifts in insect microRNA evolution"



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