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Species belonging to selected taxon:
Lottia gigantea
ABOUT THIS RECORD
ID:
MNEST038860
species:
Lottia gigantea
miRNA family:
mir-71
source:
miRBase, original name:
lgi-mir-71
(
MI0010113
)
Taxonomy by NCBI:
Lottia gigantea
Lottia
Lottiidae
Acmaeioidea
Nacellina
Docoglossa
Eogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAAGACAAGGGTAGTGAGATG
miRNA*
TCTTACTACTCTGTCTTTTGCA
mismatches:
2
bulges:
1
View larger
pre-miRNA
ACCATGCAGCAGAAATCTTTG
TGAAAGACAAGGGTAGTGAGATG
ATTCAATAATACCA
TCTTACTACTCTGTCTTTTGCA
TAGATTTTTGGATATCATCA
A
dot-bracket secondary structure
.........(((((((((.((
..(((((((.(((((((((((((
............))
))))))))))))))))))..))
.)))))))))..........
.
SIMILARITIES
miRBase
bfl-mir-71
:
0.00008
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"