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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST003964
species:
Oryza sativa
miRNA family:
MIRf88
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACCAACCGGGACTAAAAAGG
miRNA*
TTTGTAGTCCCGGTTNATAAC
mismatches:
4
bulges:
0
View larger
pre-miRNA
AAACCG
TTTGTAGTCCCGGTTNATAAC
CCCCCTTTAGTCCCGGTTTTCCAACCGGGACTACGAATCCGGGACTAAANATCGCTATCTTTAGTCCCGGTTC
AAATAATAGTCCCGGTTGGTAACCCCNACCGGGAGTAAAAANAGGGAATC
TACCAACCGGGACTAAAAAGG
GGAANCGAC
dot-bracket secondary structure
...((.
(((.(((((((((((..((..
..(((((((.(((((((((.(((((((((((((.(((.(((((((((((.((....)).))))))))))))))
......))))))))))))).)).....))))))).)))....))))....
))..))))))))))).))).)
)........
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf12092-akr
:
2e-28
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record