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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Cucumis melo subsp. melo
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Fragaria vesca
,
Fragaria x ananassa
,
Glycine soja
,
Glycyrrhiza uralensis
,
Hevea brasiliensis
,
Humulus lupulus
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Linum usitatissimum
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Quercus petraea
,
Quercus robur
,
Trifolium pratense
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST040420
species:
Arachis hypogaea
miRNA family:
MIR3518
source:
miRBase, original name:
ahy-MIR3518
(
MI0015351
)
Taxonomy by NCBI:
Arachis hypogaea
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACCTTTGGGGATATTCGTG
miRNA*
CGAGTATCACCAAATGTCACT
mismatches:
3
bulges:
0
View larger
pre-miRNA
GCTAAGCGACAATAATTTGAGAGATAATATGTAA
CGAGTATCACCAAATGTCACT
CTTTTAGATTTGTCTTATTAGTTAAGGAGTTGCAACTTATGAAGT
AAAGGATAAATTAAAAGAG
TGACCTTTGGGGATATTCGTG
GCTCATTACTTCTCAAATTA
dot-bracket secondary structure
............(((((((((((.((((..((.(
((((((((.(((((.((((((
(((((.((((((((((.(((.((...((((....))))...)).)
)))))))))))))))))))
)))).))))).))))))))).
))..)))).)))))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ,
BMC Plant Biol. 10:3(2010).
,
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"