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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST040495
species:
Glycine max
miRNA family:
MIR1514
source:
miRBase, original name:
gma-MIR1514a
(
MI0007226
)
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCATTTTTAAAATAGGCATT
miRNA*
TGCCTATTTTAAAATGAAAA
mismatches:
0
bulges:
1
View larger
pre-miRNA
CTTTGCTATT
TTCATTTTTAAAATAGGCATT
GGGGTCCCTTCTTGTTCCTCCTTTTCCTTTCCTATCCCAA
TGCCTATTTTAAAATGAAAA
CAACGATA
dot-bracket secondary structure
........((
((((((((.((((((((((((
(((((............................)))))))
))))))))))))))))))))
........
SIMILARITIES
miRBase
gma-MIR1514b
:
0.00000000002
PMRD
gma-miR1514a
:
2e-51
microPC
miR1514
:
2e-39
UniProt
no hits
RFAM
no hits
Identical with:
miR1514
from microPC (
MNEST046465
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
degradome data
download this record
evidence:
454
references
[
1
] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O,
BMC Genomics. 9:160(2008).
,
"Novel and nodulation-regulated microRNAs in soybean roots"