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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST004050
species: Oryza sativa
miRNA family: MIRf10
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTCGTCTCGCGGTTTCCAGA

miRNA*
 AGGAAATCACGAGACGAATCT

mismatches: 4
bulges: 0
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pre-miRNA
 TATTAAATATAGGTAAATAAAAAAACTAATTGCACAATTAGGCAGGAAATCACGAGACGAATCTTTTAAGCCTAATTAGTCCATGATTAGCCATAAGTGC
TACAGTAACCCACATGTGCTAATGACGGATTAATTAGGCTCAAAAGATTCGTCTCGCGGTTTCCAGACGAGTTATGAAATTAGTTTTTTTATTCGTGTCC
AAAAATT

dot-bracket secondary structure
...........((..((((((((((((((((.((.((((.....(((((((.(((((((((((((((.((((((((((((((...((((((.(((.(((.
..........))).)))))))))...)))))))))))))).))))))))))))))).))))))).....)))).)).)))))))))))))))).....))
.......


SIMILARITIES
miRBase osa-MIR442: 0.00000000000001

PMRD osa-miRf10240-akr: 5e-48

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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