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Species belonging to selected taxon:
Glycine max
ABOUT THIS RECORD
ID:
MNEST040522
species:
Glycine max
source:
miRBase, original name:
gma-MIR1523
(
MI0007240
)
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGGGATAAATGTGAGCTCA
miRNA*
ATTACTCCCGAGCTCACATTTATTTCAAAA
mismatches:
3
bulges:
10
View larger
pre-miRNA
AGGACCCATT
ATGGGATAAATGTGAGCTCA
GGAGCGATGAATAAATCCTTTCATCACTCCTC
ATTACTCCCGAGCTCACATTTATTTCAAAA
TGA
dot-bracket secondary structure
......((((
.((..(((((((((((((((
((((.((((((........)))))).))))).
.........))))))))))))))..)).))
)).
SIMILARITIES
miRBase
no hits
PMRD
gma-miR1523
:
5e-49
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
gma-miR1523
from PMRD (
MNEST048610
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O,
BMC Genomics. 9:160(2008).
,
"Novel and nodulation-regulated microRNAs in soybean roots"