ABOUT THIS RECORDspecies: Glycine soja
miRNA family: MIR1510
source: miRBase, original name: gso-MIR1510b (MI0015361)
Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTGTTTTACCTATTCCACC miRNA* AGGGATAGGTAAAACAACTAC mismatches: 2 bulges: 0 |
pre-miRNA
GGATTTTATGGAAGTGGAGGGATAGGTAAAACAACTACTTCTGTAAAAGTAATTGTTATAGTTAGTTGTTGTTTTACCTATTCCACCAATTCCATCTATC
C
dot-bracket secondary structure
((((...((((((.(((.(((((((((((((((((.(((.((((((((....)).))))))..))).))))))))))))))))).))).))))))..)))
)
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern
references
[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"
GGATTTTATGGAAGTGGAGGGATAGGTAAAACAACTACTTCTGTAAAAGTAATTGTTATAGTTAGTTGTTGTTTTACCTATTCCACCAATTCCATCTATC
C
dot-bracket secondary structure
((((...((((((.(((.(((((((((((((((((.(((.((((((((....)).))))))..))).))))))))))))))))).))).))))))..)))
)
SIMILARITIES| miRBase gma-MIR1510b: 2e-48 PMRD gma-miR1510b: 2e-48 microPC miR1510: 2e-23 | UniProt no hits RFAM no hits |
Identical with: gma-MIR1510b from miRBase (MNEST040491) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern
references
[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"
