ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR395
source: miRBase, original name: mtr-MIR395r (MI0005633)
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGTTTGGGGGAACTC miRNA* GTTCCTTTGAACGCTTCATGC mismatches: 2 bulges: 0 |
pre-miRNA
TCTTAGAGTTCCTTTGAACGCTTCATGCATGAGAATATCTATCTATTTGGTCTAAAGTCCATTAGAAAAGATAGCCATTTTTTCAATGAAGTGTTTGGGG
GAACTCTTGGA
dot-bracket secondary structure
(((.((((((((((..((((((((((....((((((..((((((...(((.(....).))).......))))))..))))))...))))))))))..)))
))))))).)))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Bonnet E, Unpublished (2007).,
TCTTAGAGTTCCTTTGAACGCTTCATGCATGAGAATATCTATCTATTTGGTCTAAAGTCCATTAGAAAAGATAGCCATTTTTTCAATGAAGTGTTTGGGG
GAACTCTTGGA
dot-bracket secondary structure
(((.((((((((((..((((((((((....((((((..((((((...(((.(....).))).......))))))..))))))...))))))))))..)))
))))))).)))
SIMILARITIES| miRBase mtr-MIR395n: 2e-52 PMRD mtr-miR395n: 2e-52 microPC miR395: 0.00002 | UniProt no hits RFAM mir-395: 3e-57 |
Identical with: mtr-MIR395l from miRBase (MNEST040719) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Bonnet E, Unpublished (2007).,
