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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST041031
species: Phaseolus vulgaris
miRNA family: MIR2119
source: miRBase, original name: pvu-MIR2119 (MI0010703)

Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCAAAGGGAGTTGTAGGGGAA

miRNA*
 CCTCTACAACTCTCTTTTATT

mismatches: 3
bulges: 0
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pre-miRNA
 AGCAATGGTGTTATTTTTATACTTTATTTTCTATGCTTTTCCTCTACAACTCTCTTTTATTTTGGATAAATGAAGTGGATTTCTACTCTTTGATTGGAGA
AAAAAAGTGGATTTCTATTTTTTTCAATCAAAGGGAGTTGTAGGGGAA

dot-bracket secondary structure
((((..(((((.......)))))..........))))..((((((((((((((((((....(((((.....((((((((..((((((.(((.........
.))).))))))..)))))))).)))))..)))))))))))))))))).


SIMILARITIES
miRBase gma-MIR2119: 0.000002

PMRD pvu-miR2119: 8e-18

microPC no hits		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references
[1] Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL, Plant Mol Biol. 70:385-401(2009)., "Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress"



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