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Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST004166
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCTAGCATTGCCCACATTCA

miRNA*
 AATGTGGGTAATGCTAGAATG

mismatches: 0
bulges: 0
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pre-miRNA
 ATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGATATATATGCGTGCCTACATTCATTAACATCTATATGAATGTGGGTA
ATGCTAGAATGACTTACAT

dot-bracket secondary structure
....((((...(((((((((((((((((((((((((.((((((((((((.(((.(((......))).))).)))))))))))).))))))))))))))))
)))))))))...))))...


SIMILARITIES
miRBase osa-MIR819e: 2e-45

PMRD osa-miR819e: 2e-45

microPC miR1120: 5e-22		UniProt no hits

RFAM MIR1122: 1e-44		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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