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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST041876
species: Festuca arundinacea
miRNA family: MIR437
source: miRBase, original name: far-MIR437 (MI0016613)

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAACATAGAGAAGTTTGACTT

miRNA*
 TCAAACATAGAGAAGTTTGA

mismatches: 9
bulges: 0
View larger
pre-miRNA
 ATGTTGTAAATACTGACAGTTTTTACAAAAAAATCTGGTCAAACATAGAGAAGTTTGACTTAGGACAAAACTAGAACTTCAATTATTTTGGAACGGATGG
AGTATTCACCAACATAATGACACCCTTCCGCACTCCTTAATATGGCCTTGAAGTCTAAAC

dot-bracket secondary structure
...(((((((.((.....)).))))))).....(((((((((((........))))))).)))).......((((.((((((.((((..(((.((((.((
.((..(((.........))).)))).))))...)))..)))).....))))))))))...


SIMILARITIES
miRBase osa-MIR437: 0.0000000005

PMRD osa-miR437: 0.0000000005

microPC miR1439: 0.0005		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record

references
[1] Unver T, Bakar M, Shearman RC, Budak H, Mol Genet Genomics. 283:397-413(2010)., "Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application"



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