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Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST004203
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATGTGGGAAATGCTAGAATG

miRNA*
 TTTTAGCATTTTCCACATTCA

mismatches: 0
bulges: 0
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pre-miRNA
 GGCTAACTACATACTTCCTCCATTTCACAATGTAAGTCATTTTAGCATTTTCCACATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGA
TTCATTAACTTCAATATGAATGTGGGAAATGCTAGAATGACTTAAATTGTGAAATGGAGGGAGTACAGTTTAATA

dot-bracket secondary structure
....((((...((((((((((((((((((((.((((((((((((((((((((((((((((((((((.(((((((((((((((((........))))))))
))))))))).)))))))))))))))))))))))))))))))))).)))))))))))))))))))).)))).....


SIMILARITIES
miRBase osa-MIR808: 2e-68

PMRD osa-miR808: 2e-68

microPC miR809: 2e-28		UniProt no hits

RFAM MIR1122: 1e-63		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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