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Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042587
species: Sorghum bicolor
miRNA family: MIR397
source: miRBase, original name: sbi-MIR397 (MI0010899)

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATTGAGTGCAGCGTTGATG

miRNA*
 CCGGCGCTGCACTCAATT

mismatches: 3
bulges: 0
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pre-miRNA
 TCATTGAGTGCAGCGTTGATGAGCCAGCTGGCCGGCCAGCCGTGCGTCCGCCGCCGGCGCCGGCCACGGCTCACCGGCGCTGCACTCAATT

dot-bracket secondary structure
..((((((((((((((((.((((((.(.((((((((..((((.(((.....)))))))))))))))))))))).)))))))))))))))).


SIMILARITIES
miRBase zma-MIR397b: 0.000001

PMRD zma-miR397b: 0.000001

microPC miR397: 0.00002		UniProt no hits

RFAM MIR397: 2e-45

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Zhang L, Ware D, Unpublished (2009).,



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