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Species belonging to selected taxon:

Sorghum propinquum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042601
species: Sorghum bicolor
miRNA family: MIR437
source: miRBase, original name: sbi-MIR437a (MI0010902)

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTTAGAGAAGTTTGACTT

miRNA*
 GTCAAACTTCTCTATGTTTTAA

mismatches: 2
bulges: 1
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pre-miRNA
 AAGTCAAACTTCTCTATGTTTTAACTAAGTTTATAGAAATATATAACAACATCTAGAATACCACCAAGTTTACAGAAATATATATAATGACATCTAGAAT
ACAAGCAAGTGCACTCTCAAGATATTAATTTGGTGTTTAATGTTGGCACCTTTTTATAGATTTAGTCAAAGTTAGAGAAGTTTGACTTAG

dot-bracket secondary structure
((((((((((((((((...(((.((((((((((((((((.......((((((...((((((((....((((....))))........(((.((((.((..
....((....))....)).)))).)))...)))))))).)))))).....)))))))))))))))).)))..))))))))))))))))..


SIMILARITIES
miRBase sbi-MIR437o: 0.000000003

PMRD sbi-miR437o: 0.000000003

microPC miR437: 0.00001		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Zhang L, Ware D, Unpublished (2009).,



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