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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042605
species: Sorghum bicolor
miRNA family: MIR437
source: miRBase, original name: sbi-MIR437e (MI0010906)

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTTAGAGAAGTTTGACTT

miRNA*

mismatches: 5
bulges: 2
View larger
pre-miRNA
 CAGATTACTGATTTTGATCAACATTGTCTGAAATACTAAATCAATTAGATGTTAATATATATTTTTCTGAAAACTTGGTCAAAGTTAGAGAAGTTTGACT
T

dot-bracket secondary structure
((((((.((((((((((((((.....((.((((..((((.....)))).(((......)))..)))).))....))))))))))))))...))))))...
.


SIMILARITIES
miRBase sbi-MIR437k: 0.000000000000001

PMRD sbi-miR437e: 1e-52

microPC miR437: 0.00000000000008		UniProt no hits

RFAM no hits

Identical with: sbi-miR437e from PMRD (MNEST054502)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
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references
[1] Zhang L, Ware D, Unpublished (2009).,



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