miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum, Taenia solium, Schmidtea mediterranea



ABOUT THIS RECORD

ID: MNEST044220
species: Schistosoma japonicum
source: Hao et al., original name: sja-Novel-36

Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATCACAGTCCAAGCTTTGGTAA

miRNA*
ACCAACTTAGACTGAGTTATA

mismatches: 3
bulges: 2

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pre-miRNA
TCCCACCGCTCTTACCAACTTAGACTGAGTTATACTGCTACTGTAAGCTTTGTATATCACAGTCCAAGCTTTGGTAAGTTTTGATGGG

dot-bracket secondary structure
.((((.((..(((((((((((.(((((.(.(((((.(((......)))...))))).).))))).)))..))))))))...)).))))


SIMILARITIES
miRBase sja-mir-2e: 6e-42

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

Identical with: sja-mir-2e from miRBase (MNEST038965)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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