ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Hao et al., original name: sja-Novel-36
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATCACAGTCCAAGCTTTGGTAA miRNA* ACCAACTTAGACTGAGTTATA mismatches: 3 bulges: 2 |
pre-miRNA
TCCCACCGCTCTTACCAACTTAGACTGAGTTATACTGCTACTGTAAGCTTTGTATATCACAGTCCAAGCTTTGGTAAGTTTTGATGGG
dot-bracket secondary structure
.((((.((..(((((((((((.(((((.(.(((((.(((......)))...))))).).))))).)))..))))))))...)).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCCCACCGCTCTTACCAACTTAGACTGAGTTATACTGCTACTGTAAGCTTTGTATATCACAGTCCAAGCTTTGGTAAGTTTTGATGGG
dot-bracket secondary structure
.((((.((..(((((((((((.(((((.(.(((((.(((......)))...))))).).))))).)))..))))))))...)).))))
SIMILARITIES| miRBase sja-mir-2e: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: sja-mir-2e from miRBase (MNEST038965) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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