miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides

ABOUT THIS RECORD

ID: MNEST044813
species: Populus tremula x Populus alba
source: microPC, original name: miR1533

Taxonomy by NCBI:
Populus tremula x Populus alba Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
ATAATAACAATAATAAT

miRNA*
TATTGTTGTTGTTGT

mismatches: 0
bulges: 0

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pre-miRNA
ATAATAACAATAATAATAGTAATTATTATTATTGTTGTTGTTGT

dot-bracket secondary structure
((((((((((((((((((((....))))))))))))))))))))

SIMILARITIES

miRBase sja-mir-307: 0.0001

PMRD no hits

microPC no hits

UniProt no hits

RFAM mir-598: 0.0000001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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